Precision detection of rifampicin-resistant_L378R mutation inwith CRISPR-Cas12a.
Yuma Yang, Li Yang, Hao Ma, Shuming Zhang, Yue Zhu, Sihan Zhang, Xiting Lin, Haitao La, et al. (14 authors)
Analytical methods : advancing methods and applications · 2026-02
Abstract
Rifampicin is one of the most effective anti-tuberculosis drugs. However, certain strains of(MTB) have developed resistance to rifampicin, making it crucial to identify alternative drugs for treating rifampicin-resistant MTB infections. Mutations in thegene play a pivotal role in MTB's resistance to rifampicin. Therefore, identifying these mutations is essential for effectively managing rifampicin-resistant MTB strains. Here, we developed a CRISPR-Cas12a platform integrated with recombinase polymerase amplification (RPA) and fluorescence detection, which was specifically designed to identify the_L378R mutation associated with rifampicin resistance in MTB. Our findings indicated that this detection technique exhibited high specificity and did not cross-react with reference samples constructed from the genomes of MTB H37Rv,,, and. The RPA-CRISPR-Cas12a-based platform established in this research was simple, sensitive, and specific for detecting the rifampicin-resistant MTB strain with the_L378R mutation. These results suggest its potential applicability in clinical diagnosis for identifying the MTB_L378R mutation.
MeSH terms
- Rifampin
- Mycobacterium tuberculosis
- CRISPR-Cas Systems
- Drug Resistance, Bacterial
- Bacterial Proteins
- DNA-Directed RNA Polymerases
- Mutation
- Humans
- Antitubercular Agents
- Nucleic Acid Amplification Techniques
- Endodeoxyribonucleases
- CRISPR-Associated Proteins