TB Research

A Key Metabolic Protein in Active Mycobacterium tuberculosis: Insights into Carbon, Nitrogen, and Sulfur Metabolism.

Parissa Farnia, Ali Akbar Velayati, Jalaledin Ghanavi, Poopak Farnia

Advances in experimental medicine and biology · 2026-01

Abstract

Mycobacterium tuberculosis (Mtb) employs a highly adaptable network of metabolic pathways that are pivotal for its survival and pathogenesis within the host during both exponential growth and persistent infection phases. Central carbon metabolism in Mtb exhibits remarkable flexibility, enabling the bacterium to utilize diverse carbon sources efficiently. In the absence of glucose, Mtb preferentially metabolizes fatty acids as primary carbon substrates. This metabolic shift is supported by the glyoxylate shunt and methyl citrate cycle, which replenish tricarboxylic acid (TCA) cycle intermediates essential for energy production and biosynthesis. Key enzymes such as isocitrate lyase (icl) and methylcitrate lyase (mcl) facilitate the catabolism of fatty acids and maintain TCA cycle functionality, thereby sustaining bacterial growth under nutrient-limited conditions. Further enhancing metabolic adaptability, Mtb modulates central carbon metabolism through lysine acetylation, a posttranslational modification that regulates enzyme activity, particularly within fatty acid metabolic pathways. This regulatory mechanism allows Mtb to fine-tune its metabolic responses and optimize carbon utilization in response to fluctuating environmental nutrient availability.Nitrogen metabolism in Mtb is equally versatile, characterized by the capacity to utilize a variety of nitrogen sources. Amino acids such as glutamine, glutamate, aspartate, and asparagine serve as superior nitrogen donors compared to inorganic ammonium (NH₄), reflecting Mtb's adaptation to the nutrient milieu of the host, where these amino acids are abundant. Alanine dehydrogenase (ald) exemplifies the complexity of nitrogen metabolism by functioning dually in alanine utilization and ammonium assimilation. Mtb exhibits limited homeostatic control over certain intracellular amino acid pools and demonstrates the ability to co-metabolize multiple nitrogen sources simultaneously, underscoring the dynamic nature of its nitrogen metabolic network.Sulfur metabolism plays a critical role in maintaining redox balance and supporting Mtb virulence. The sulfate assimilation pathway is central to the biosynthesis of sulfur-containing metabolites such as cysteine (Cys), which serves as a precursor for low molecular weight thiols, including mycothiol (MSH) and ergothioneine (EGT). These thiols are essential antioxidants that protect Mtb from oxidative stress encountered within host macrophages. The trans-sulfuration pathway, which converts methionine (Met) to cysteine, links methylation processes to antioxidant metabolism, further contributing to sulfur homeostasis. Sulfotransferases (Stfs) utilize 3'-phosphoadenosine 5'-phosphosulfate (PAPS) as a sulfate donor to catalyze the sulfation of lipids and other molecules, thereby influencing Mtb's virulence and survival mechanisms. Overall, Mtb's carbon, nitrogen, and sulfur metabolic pathways are intricately interconnected, with each influencing the others to create a robust and flexible metabolic network. This metabolic integration is fundamental to Mtb's ability to thrive within the hostile environment of the host. A comprehensive understanding of these pathways is critical for identifying novel therapeutic targets aimed at disrupting Mtb's metabolic adaptability and pathogenicity. Despite the challenges posed by Mtb's metabolic resilience, ongoing research into its metabolic mechanisms continues to provide valuable insights that will inform the development of innovative antituberculosis therapies.

MeSH terms

  • Mycobacterium tuberculosis
  • Carbon
  • Nitrogen
  • Sulfur
  • Bacterial Proteins
  • Humans
  • Metabolic Networks and Pathways
  • Isocitrate Lyase