Molecular docking and pharmacokinetics of benzimidazole-based FtsZ inhibitors for tuberculosis
Pratiksha N. Sonwane, Manoj Ramesh Kumbhare
Scientific Reports · 2025-10
Abstract
Benzimidazole derivatives are privileged heterocyclic scaffolds with broad-spectrum pharmacological activities, notably antitubercular and antibacterial. In particular, 1,2-disubstituted benzimidazoles have emerged as potent bioactive candidates due to their unique structural features and target specificity. In this study, fifty novel 1,2-disubstituted benzimidazole derivatives were computationally screened against Mycobacterium tuberculosis cell division protein FtsZ (PDB ID: 2Q1Y, GTP-γ-S complex) using AutoDock Vina v1.5.6. Docking poses were analyzed via PyMOL and Discovery Studio Visualizer to elucidate key binding interactions. Pharmacokinetic evaluation through SwissADME was performed to predict drug-likeness and ADME profiles. ADME analysis revealed that several lead candidates possessed favorable absorption, distribution, metabolism, and excretion properties, underscoring their suitability as orally bioavailable agents. Docking scores ranged from - 6.8 to - 9.6 kcal/mol, with multiple derivatives surpassing the binding affinity of standard antitubercular drugs, including isoniazid and para-aminosalicylic acid. The integration of structure-based molecular docking with in silico pharmacokinetic profiling highlights substituted benzimidazole scaffolds as promising next-generation FtsZ inhibitors for antitubercular drug development.
MeSH terms
- ADME
- In silico
- Benzimidazole
- FtsZ
- Docking (animal)
- AutoDock
- Mycobacterium tuberculosis
- Pharmacokinetics
- Chemistry
- Pharmacology
- Virtual screening
- Computational biology
- Drug discovery
- Isoniazid
- Moxifloxacin
- Biochemistry
- Drug
- Plasma protein binding
- Tuberculosis