TB Research

Investigating potential transmission of antimicrobial resistance in an open-plan hospital ward: a cross-sectional metagenomic study of resistome dispersion in a lower middle-income setting

Ashokan A, Hanson J, Aung NM, Kyi MM, Taylor SL, Choo JM, Flynn E, Mobegi F, et al. (12 authors)

Antimicrobial resistance and infection control · 2021-03

Abstract

Background Antimicrobial resistance (AMR) represents a profound global health threat. Reducing AMR spread requires the identification of transmission pathways. The extent to which hospital wards represent a venue for substantial AMR transmission in low- and middle-income countries settings is poorly understood. Methods Rectal swabs were obtained from adult male inpatients in a "Nightingale" model general medicine ward in Yangon, Myanmar. Resistome characteristics were characterised by metagenomic sequencing. AMR gene carriage was related to inter-patient distance (representing inter-patient interaction) using distance-based linear models. Clinical predictors of AMR patterns were identified through univariate and multivariate regression. Results Resistome similarity showed a weak but significant positive correlation with inter-patient distance (r = 0.12, p = 0.04). Nineteen AMR determinants contributed significantly to this relationship, including those encoding β-lactamase activity (OXA-1, NDM-7; adjusted p Conclusions AMR dispersion patterns primarily reflect the placement of particular patients by their condition, rather than AMR transmission. The proportion of AMR determinants that varied with inter-patient distance was limited, suggesting that nosocomial transmission is a relatively minor contributor to population-level carriage.

MeSH terms

  • Humans
  • Tuberculosis
  • Sepsis
  • Anti-Bacterial Agents
  • Cross-Sectional Studies
  • Infection Control
  • Drug Resistance, Multiple, Bacterial
  • Developing Countries
  • Adolescent
  • Adult
  • Aged
  • Middle Aged
  • Inpatients
  • Hospitals, Teaching
  • Patients' Rooms
  • Hospitals
  • Hospitals, Public
  • Myanmar
  • Male
  • Young Adult
  • Metagenomics
  • Tertiary Care Centers
  • Spatial Analysis